Research workbench
Structure of a putative methyltransferase from thermoplasma acidophilum.
Analyse Structure of a putative methyltransferase from thermoplasma acidophilum. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1YB2
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein TA0852
- UniProt
- Q9HJW1
- Pockets
- 2 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 24% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein TA0852 | protein | 230 | 24% helix, 34% strand | Q9HJW1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 148 | 0.53 | 0.80 | 23 | empty |
| 2 | 60 | 0.29 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 11 modified (engineered).
Compared structures
- 1YB2 · Structure of a putative methyltransferase from Thermoplasma acidophilum. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HJW1
- Elsewhere: RCSB PDB 1YB2 · PDBe 1YB2 · UniProt Q9HJW1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.