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1.7 a crystal structure of protein of unknown function SA2161 from meticillin-resistant staphylococcus aureus, probable acetyltransferase

Analyse 1.7 a crystal structure of protein of unknown function SA2161 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1Y7R
Type: protein
Length: 266 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein SA2161
UniProt: Q99RQ6
Ligands: PO4
Pockets: 2 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein SA2161	protein	133	34% helix, 34% strand	Q99RQ6

Ligands and binding sites

PO4 · Phosphate ion · ion · 8 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	380	0.69	0.81	42	PO4
2	412	0.68	0.80	41	PO4

Interfaces

1 interface between chains.

A–B · 2545 Å² buried · 55 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 14 modified (engineered).

Compared structures

1Y7R · 1.7 A Crystal Structure of Protein of Unknown Function SA2161 from Meticillin-Resistant… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99RQ6
Elsewhere: RCSB PDB 1Y7R · PDBe 1Y7R · UniProt Q99RQ6

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