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Structure of af-6 PDZ domain

Analyse Structure of af-6 PDZ domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1XZ9
Type: protein
Length: 101 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Afadin
UniProt: Q5TIG6
Pockets: 1 · best druggability 0.70

Structure

solution nmr · 1 distinct chain · 13% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Afadin	protein	101	13% helix, 29% strand	Q5TIG6

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.70	0.98	19	empty

Compared structures

1XZ9 · Structure of AF-6 PDZ domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5TIG6
Elsewhere: RCSB PDB 1XZ9 · PDBe 1XZ9 · UniProt Q5TIG6

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