Research workbench
Solution structure of cyclophilin like 1(PPIL1) and insights into its interaction with skip
Analyse Solution structure of cyclophilin like 1(PPIL1) and insights into its… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XWN
- Type
- protein
- Length
- 166 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-prolyl cis-trans isomerase like 1
- EC
- 5.2.1.8
- UniProt
- Q9Y3C6
- Pockets
- 2 · best druggability 0.56
Structure
solution nmr · 1 distinct chain · 13% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-prolyl cis-trans isomerase like 1 (EC 5.2.1.8) | protein | 166 | 13% helix, 31% strand | Q9Y3C6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.56 | 0.85 | 24 | empty |
| 2 | 54 | 0.27 | 0.74 | 20 | empty |
Compared structures
- 1XWN · solution structure of cyclophilin like 1(PPIL1) and insights into its interaction with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y3C6 · AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase-like 1 (Q9Y3C6) · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y3C6
- Elsewhere: RCSB PDB 1XWN · PDBe 1XWN · UniProt Q9Y3C6
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