Research workbench
X-ray structure of putative lactam utilization protein ybgl. northeast structural genomics consortium target ET90.
Analyse X-ray structure of putative lactam utilization protein ybgl. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XW8
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- UPF0271 protein ybgl
- UniProt
- P75746
- Pockets
- 1 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0271 protein ybgl | protein | 230 | 40% helix, 19% strand | P75746 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 252 | 0.52 | 0.75 | 43 | empty |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 1XW8 · X-ray structure of putative lactam utilization protein YBGL. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P75746 · AlphaFold monomer V2.0 prediction for 5-oxoprolinase subunit a (P75746) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P75746
- Elsewhere: RCSB PDB 1XW8 · PDBe 1XW8 · UniProt P75746
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