Research workbench
NMR structure of SSO10A, a hyperthermophile DNA-binding protein with an extended anti-parallel coiled coil
Analyse NMR structure of SSO10A, a hyperthermophile DNA-binding protein with an… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XSX
- Type
- protein
- Length
- 190 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SSO10A
- UniProt
- Q5W1E8
- Pockets
- 2 · best druggability 0.51
Structure
solution nmr · 1 distinct chain · 62% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | SSO10A | protein | 95 | 62% helix, 9% strand | Q5W1E8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 141 | 0.51 | 0.79 | 24 | empty |
| 2 | 127 | 0.48 | 0.78 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 1127 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1XSX · NMR Structure of Sso10a, a Hyperthermophile DNA-binding Protein with an Extended… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5W1E8
- Elsewhere: RCSB PDB 1XSX · PDBe 1XSX · UniProt Q5W1E8
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