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X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from staphylococcus aureus subsp. aureus MU50

Analyse X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1XSV
Type: protein
Length: 212 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical UPF0122 protein SAV1236
UniProt: P67248
Pockets: 1 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 82% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical UPF0122 protein SAV1236	protein	106	82% helix, 0% strand	P67248

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	131	0.53	0.81	25	empty

Interfaces

1 interface between chains.

A–B · 1118 Å² buried · 9 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

1XSV · X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from… · the same entry in another collection · chain A against A, TM-score 1.00
P67248 · AlphaFold monomer V2.0 prediction for UPF0122 protein SAV1236 (P67248) · a predicted model of the same protein · chain A against A, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P67248
Elsewhere: RCSB PDB 1XSV · PDBe 1XSV · UniProt P67248

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