Research workbench
X-ray structure of iaa-aminoacid hydrolase from arabidopsis thaliana gene AT5G56660
Analyse X-ray structure of iaa-aminoacid hydrolase from arabidopsis thaliana gene… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XMB
- Type
- protein
- Length
- 375 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Iaa-amino acid hydrolase homolog 2
- UniProt
- P54970
- Pockets
- 2 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Iaa-amino acid hydrolase homolog 2 | protein | 375 | 39% helix, 27% strand | P54970 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.54 | 0.81 | 22 | empty |
| 2 | 96 | 0.33 | 0.73 | 15 | empty |
Compared structures
- 1XMB · X-ray structure of IAA-aminoacid hydrolase from Arabidopsis thaliana gene AT5G56660 · the same entry in another collection · chain A against A, TM-score 1.00
- P54970 · AlphaFold monomer V2.0 prediction for iaa-amino acid hydrolase ILR1-like 2 (P54970) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54970
- Elsewhere: RCSB PDB 1XMB · PDBe 1XMB · UniProt P54970
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