Research workbench
Solution structure of iron-sulfur cluster assembly protein iscu from bacillus subtilis, with zinc bound at the active site. northeast structural genomics consortium target SR17
Analyse Solution structure of iron-sulfur cluster assembly protein iscu from bacillus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XJS
- Type
- protein
- Length
- 147 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nifu-like protein
- UniProt
- O32163
- Ligands
- ZN
- Pockets
- 4 · best druggability 0.69
Structure
solution nmr · 1 distinct chain · 46% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nifu-like protein | protein | 147 | 46% helix, 16% strand | O32163 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.69 | 0.97 | 17 | empty |
| 2 | 92 | 0.44 | 0.79 | 15 | empty |
| 3 | 86 | 0.37 | 0.76 | 17 | empty |
| 4 | 64 | 0.37 | 0.78 | 17 | empty |
Compared structures
- 1XJS · Solution structure of Iron-Sulfur cluster assembly protein IscU from Bacillus subtilis… · the same entry in another collection · chain A against A, TM-score 1.00
- O32163 · AlphaFold monomer V2.0 prediction for zinc-dependent sulfurtransferase sufu (O32163) · a predicted model of the same protein · chain A against A, TM-score 0.70
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O32163
- Elsewhere: RCSB PDB 1XJS · PDBe 1XJS · UniProt O32163
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