Research workbench
X-ray crystal structure of wild-type xerocomus chrysenteron lectin xcl
Analyse X-ray crystal structure of wild-type xerocomus chrysenteron lectin xcl in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XI0
- Type
- protein
- Length
- 285 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lectin
- UniProt
- Q8WZC9
- Pockets
- 1 · best druggability 0.27
Structure
x-ray diffraction · 2 distinct chains · 12% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lectin | protein | 143 | 11% helix, 50% strand | Q8WZC9 |
| B | Lectin | protein | 142 | 13% helix, 53% strand | Q8WZC9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.27 | 0.74 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 834 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 1XI0 · X-ray crystal structure of wild-type Xerocomus chrysenteron lectin XCL · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WZC9
- Elsewhere: RCSB PDB 1XI0 · PDBe 1XI0 · UniProt Q8WZC9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.