Research workbench
Synchrotron X-ray powder diffraction study of hexagonal turkey egg- white lysozyme
Analyse Synchrotron X-ray powder diffraction study of hexagonal turkey egg- white… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XFT
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- powder diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lysozyme C
- EC
- 3.2.1.17
- UniProt
- P00703
- Pockets
- 3 · best druggability 0.79
Structure
powder diffraction · 1 distinct chain · 38% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysozyme C (EC 3.2.1.17) | protein | 128 | 38% helix, 11% strand | P00703 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 119 | 0.79 | 0.96 | 29 | empty |
| 2 | 70 | 0.38 | 0.78 | 16 | empty |
| 3 | 64 | 0.35 | 0.77 | 16 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1XFT · Synchrotron X-ray Powder Diffraction Study of Hexagonal Turkey Egg-white Lysozyme · the same entry in another collection · chain A against A, TM-score 1.00
- P00703 · AlphaFold monomer V2.0 prediction for lysozyme C (P00703) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00703
- Elsewhere: RCSB PDB 1XFT · PDBe 1XFT · UniProt P00703
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