Research workbench
Crystal structure of GRAM_POSITIVE bacillus subtilis glucose inhibited division protein B (gidb), structural genomics, mcsg
Analyse Crystal structure of GRAM_POSITIVE bacillus subtilis glucose inhibited division… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XDZ
- Type
- protein
- Length
- 238 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Methyltransferase gidb
- EC
- 2.1.-.-
- UniProt
- P25813
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methyltransferase gidb (EC 2.1.-.-) | protein | 238 | 43% helix, 22% strand | P25813 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 147 | 0.41 | 0.74 | 27 | empty |
| 2 | 124 | 0.41 | 0.75 | 21 | empty |
Compared structures
- 1XDZ · Crystal Structure of Gram_Positive Bacillus subtilis Glucose inhibited Division protein B… · the same entry in another collection · chain A against A, TM-score 1.00
- P25813 · AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase G… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25813
- Elsewhere: RCSB PDB 1XDZ · PDBe 1XDZ · UniProt P25813
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.