Research workbench
Solution structure of an RNA duplex including a C-U base-pair
Analyse Solution structure of an RNA duplex including a C-U base-pair in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1C4L
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3'); RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3')
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3') | rna | 9 | — | — |
| B | RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3') | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 433 Ų buried · 28 hydrogen bonds · nucleic-nucleic
Compared structures
- 1C4L · Solution structure of an RNA duplex including a C-U base-pair · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1C4L · PDBe 1C4L
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