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Structure of 6-aminohexanoate-dimer hydrolase

Analyse Structure of 6-aminohexanoate-dimer hydrolase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WYB
Type: protein
Length: 378 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 6-aminohexanoate-dimer hydrolase
EC: 3.5.1.46
UniProt: P07062
Pockets: 2 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	6-aminohexanoate-dimer hydrolase (EC 3.5.1.46)	protein	378	35% helix, 16% strand	P07062

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	327	0.65	0.80	48	empty
2	202	0.47	0.74	32	empty

Compared structures

1WYB · Structure of 6-aminohexanoate-dimer hydrolase · the same entry in another collection · chain A against A, TM-score 1.00
P07062 · AlphaFold monomer V2.0 prediction for 6-aminohexanoate-dimer hydrolase (P07062) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07062
Elsewhere: RCSB PDB 1WYB · PDBe 1WYB · UniProt P07062

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