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Crystal structure of heme binding protein, an autotransporter hemoglobine protease from pathogenic escherichia COLI

Analyse Crystal structure of heme binding protein, an autotransporter hemoglobine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WXR
Type: protein
Length: 1,035 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Haemoglobin protease
UniProt: O88093
Pockets: 8 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Haemoglobin protease	protein	1035	8% helix, 44% strand	O88093

Pockets

8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	460	0.71	0.82	44	empty
2	91	0.42	0.79	22	empty
3	94	0.42	0.78	25	empty
4	62	0.38	0.80	19	empty
5	70	0.35	0.76	20	empty

Compared structures

1WXR · Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from… · the same entry in another collection · chain A against A, TM-score 1.00
O88093 · AlphaFold monomer V2.0 prediction for hemoglobin-binding protease hbp autotransporter… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O88093
Elsewhere: RCSB PDB 1WXR · PDBe 1WXR · UniProt O88093

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