Research workbench
NMR structure determined for mlv nc complex with RNA sequence ccuccgu
Analyse NMR structure determined for mlv nc complex with RNA sequence ccuccgu in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1WWF
- Type
- protein + RNA
- Length
- 63 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleoprotein P10; 5'-R(P*CP*CP*UP*CP*CP*GP*U)-3'
- UniProt
- P03332
- Ligands
- ZN
Structure
solution nmr · 2 distinct chains · 5% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoprotein P10 | protein | 56 | 5% helix, 4% strand | P03332 |
| B | 5'-R(P*CP*CP*UP*CP*CP*GP*U)-3' | rna | 7 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 871 Ų buried · 24 hydrogen bonds · protein-nucleic
Compared structures
- 1WWF · NMR Structure Determined for MLV NC Complex with RNA Sequence CCUCCGU · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03332
- Elsewhere: RCSB PDB 1WWF · PDBe 1WWF · UniProt P03332
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