Research workbench
Crystal structure of ST0229, function unknown protein from sulfolobus tokodaii
Analyse Crystal structure of ST0229, function unknown protein from sulfolobus tokodaii in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1WSC
- Type
- protein
- Length
- 439 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein ST0229
- UniProt
- Q976G0
- Pockets
- 4 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 35% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein ST0229 | protein | 225 | 37% helix, 28% strand | Q976G0 |
| B | Hypothetical protein ST0229 | protein | 214 | 33% helix, 24% strand | Q976G0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 768 | 0.73 | 0.78 | 97 | empty |
| 2 | 52 | 0.31 | 0.76 | 17 | empty |
| 3 | 50 | 0.31 | 0.77 | 11 | empty |
| 4 | 53 | 0.29 | 0.75 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 1059 Ų buried · 11 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide, 2 modified (disulfide, engineered).
Compared structures
- 1WSC · Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii · the same entry in another collection · chain A against A, TM-score 1.00
- Q976G0 · AlphaFold monomer V2.0 prediction for protein STK_02290 (Q976G0) · a predicted model of the same protein · chain A against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q976G0
- Elsewhere: RCSB PDB 1WSC · PDBe 1WSC · UniProt Q976G0
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