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Crystal structure of hendra virus fusion core

Analyse Crystal structure of hendra virus fusion core in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WP8
Type: protein
Length: 191 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fusion glycoprotein F0,FUSION glycoprotein F0
UniProt: O89342
Pockets: 1 · best druggability 0.76

Structure

x-ray diffraction · 3 distinct chains · 91% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fusion glycoprotein F0,FUSION glycoprotein F0	protein	64	89% helix, 0% strand	O89342
B	Fusion glycoprotein F0,FUSION glycoprotein F0	protein	64	91% helix, 0% strand	O89342
C	Fusion glycoprotein F0,FUSION glycoprotein F0	protein	63	92% helix, 0% strand	O89342

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	72	0.76	0.99	18	empty

Interfaces

3 interfaces between chains.

A–C · 993 Å² buried · 6 hydrogen bonds · protein-protein
A–B · 954 Å² buried · 5 hydrogen bonds · protein-protein
B–C · 907 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

1WP8 · crystal structure of Hendra Virus fusion core · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O89342
Elsewhere: RCSB PDB 1WP8 · PDBe 1WP8 · UniProt O89342

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