Research workbench
Solution structure of H12C mutant of the N-terminal zn binding domain of HIV-1 integrase complexed to cadmium, NMR, minimized average structure
Analyse Solution structure of H12C mutant of the N-terminal zn binding domain of HIV-1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1WJE
- Type
- protein
- Length
- 92 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HIV-1 integrase
- UniProt
- P04587
- Ligands
- CD
Structure
solution nmr · 1 distinct chain · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | HIV-1 integrase | protein | 46 | 74% helix, 0% strand | P04587 |
Ligands and binding sites
- CD · Cadmium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 463 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 1WJE · Solution structure of H12C mutant of the N-terminal zn binding domain of HIV-1 integrase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04587
- Elsewhere: RCSB PDB 1WJE · PDBe 1WJE · UniProt P04587
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