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Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D form), NMR, regularized mean structure

Analyse Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1WJA
Type
protein
Length
94 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
HIV-1 integrase
UniProt
P35963
Ligands
ZN

Structure

solution nmr · 1 distinct chain · 70% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BHIV-1 integraseprotein4770% helix, 0% strandP35963

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 519 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 1WJA · Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D form), NMR… · the same entry in another collection · chain A against A, TM-score 1.00

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