Research workbench
Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 12 lacking the second zinc-binding site
Analyse Solution structure of the DNA-binding domain of squamosa promoter binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1WJ0
- Type
- protein
- Length
- 58 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Squamosa promoter-binding protein-like 12
- UniProt
- Q9S7P5
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 7% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Squamosa promoter-binding protein-like 12 | protein | 58 | 7% helix, 19% strand | Q9S7P5 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1WJ0 · Solution Structure of the DNA-Binding Domain of Squamosa Promoter Binding Protein-Like 12… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9S7P5 · AlphaFold monomer V2.0 prediction for squamosa promoter-binding-like protein 12 (Q9S7P5) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9S7P5
- Elsewhere: RCSB PDB 1WJ0 · PDBe 1WJ0 · UniProt Q9S7P5
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