Research workbench
Ra domain of guanine nucleotide exchange factor for RAP1
Analyse Ra domain of guanine nucleotide exchange factor for RAP1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1WGY
- Type
- protein
- Length
- 104 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rap guanine nucleotide exchange factor 5
- UniProt
- Q92565
- Pockets
- 1 · best druggability 0.41
Structure
solution nmr · 1 distinct chain · 13% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rap guanine nucleotide exchange factor 5 | protein | 104 | 13% helix, 22% strand | Q92565 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.41 | 0.77 | 18 | empty |
Compared structures
- 1WGY · RA domain of guanine nucleotide exchange factor for Rap1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q92565 · AlphaFold monomer V2.0 prediction for rap guanine nucleotide exchange factor 5 (Q92565) · a predicted model of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92565
- Elsewhere: RCSB PDB 1WGY · PDBe 1WGY · UniProt Q92565
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.