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Crystal structure of the conserved hypothetical protein TT1887 from thermus thermophilus HB8

Analyse Crystal structure of the conserved hypothetical protein TT1887 from thermus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WEH
Type: protein
Length: 342 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Conserved hypothetical protein TT1887
UniProt: Q5SLJ9
Pockets: 4 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Conserved hypothetical protein TT1887	protein	171	43% helix, 17% strand	Q5SLJ9

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	110	0.46	0.79	23	empty
2	103	0.45	0.79	23	empty
3	58	0.32	0.76	14	empty
4	62	0.31	0.75	14	empty

Interfaces

1 interface between chains.

A–B · 594 Å² buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

1WEH · Crystal structure of the conserved hypothetical protein TT1887 from Thermus thermophilus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5SLJ9
Elsewhere: RCSB PDB 1WEH · PDBe 1WEH · UniProt Q5SLJ9

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