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Structure of a beta-1,3-glucan binding CBM6 from bacillus halodurans in complex with xylobiose
Analyse Structure of a beta-1,3-glucan binding CBM6 from bacillus halodurans in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1W9T
- Type
- protein
- Length
- 268 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- BH0236 protein
- UniProt
- Q9KG76
- Ligands
- XYP, XYS, NA
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | BH0236 protein | protein | 134 | 0% helix, 59% strand | Q9KG76 |
Ligands and binding sites
- XYP · beta-D-xylopyranose · sugar · 8 copies · chains A, B
- XYS · alpha-D-xylopyranose · sugar · 2 copies · chains A, B
- NA · Sodium ion · metal · 6 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 351 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 1W9T · Structure of a beta-1,3-glucan binding CBM6 from Bacillus halodurans in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KG76
- Elsewhere: RCSB PDB 1W9T · PDBe 1W9T · UniProt Q9KG76
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