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Cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component of the type II secretion system of vibrio cholerae

Analyse Cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component of the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1W97
Type: protein
Length: 229 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Type II secretion system protein L
UniProt: P45782
Pockets: 1 · best druggability 0.29

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
L	Type II secretion system protein L	protein	229	20% helix, 34% strand	P45782

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	70	0.29	0.74	24	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

1W97 · cyto-EpsL: the cytoplasmic domain of EpsL, an inner membrane component of the type II… · the same entry in another collection · chain L against L, TM-score 1.00
P45782 · AlphaFold monomer V2.0 prediction for type II secretion system protein L (P45782) · a predicted model of the same protein · chain L against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P45782
Elsewhere: RCSB PDB 1W97 · PDBe 1W97 · UniProt P45782

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