Research workbench
At base pairs are less stable than gc base pairs in Z-DNA: the crystal structure of D(M(5)CGTAM(5)CG)
Analyse At base pairs are less stable than gc base pairs in Z-DNA: the crystal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VTW
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*(CH3)CP*GP*TP*AP*(CH3)CP*G)-3')
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*(CH3)CP*GP*TP*AP*(CH3)CP*G)-3') | dna | 6 | — | — |
Interfaces
1 interface between chains.
- A–B · 342 Ų buried · 19 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 4 modified (nucleotide modification).
Compared structures
- 1VTW · AT Base Pairs Are Less Stable than GC Base Pairs in Z-DNA: The Crystal Structure of… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1VTW · PDBe 1VTW
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