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Glycosylated eel calcitonin

Analyse Glycosylated eel calcitonin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1BZB
Type: protein
Length: 32 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (calcitonin)
UniProt: P01262
Ligands: MAN, NAG, NH2

Structure

solution nmr · 1 distinct chain · 50% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (calcitonin)	protein	32	50% helix, 0% strand	P01262

Ligands and binding sites

MAN · alpha-D-mannopyranose · sugar · 6 copies
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

1BZB · Glycosylated eel calcitonin · the same entry in another collection · chain A against A, TM-score 1.00
P01262 · AlphaFold monomer V2.0 prediction for calcitonin (P01262) · a predicted model of the same protein · chain A against A, TM-score 0.52

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01262
Elsewhere: RCSB PDB 1BZB · PDBe 1BZB · UniProt P01262

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