Research workbench
X-ray structure of gene product from arabidopsis thaliana AT2G34160
Analyse X-ray structure of gene product from arabidopsis thaliana AT2G34160 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VM0
- Type
- protein
- Length
- 196 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Unknown protein
- UniProt
- O22969
- Ligands
- K, NO3
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Unknown protein | protein | 93 | 41% helix, 38% strand | O22969 |
| B | Unknown protein | protein | 103 | 38% helix, 35% strand | O22969 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 695 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 1VM0 · X-ray structure of gene product from arabidopsis thaliana AT2G34160 · the same entry in another collection · chain A against A, TM-score 1.00
- O22969 · AlphaFold monomer V2.0 prediction for uncharacterized protein AT2G34160 (O22969) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O22969
- Elsewhere: RCSB PDB 1VM0 · PDBe 1VM0 · UniProt O22969
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