Research workbench
PDZ2 from ptp-bl in complex with the C-terminal ligand from the apc protein
Analyse PDZ2 from ptp-bl in complex with the C-terminal ligand from the apc protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VJ6
- Type
- protein
- Length
- 101 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein-tyrosine-phosphatase (nonreceptor type 13); Adenomatous polyposis COLI protein
- EC
- 3.1.3.48
- UniProt
- Q64512, Q61315
Structure
solution nmr · 2 distinct chains · 14% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein-tyrosine-phosphatase (nonreceptor type 13) (EC 3.1.3.48) | protein | 95 | 15% helix, 34% strand | Q64512 |
| B | Adenomatous polyposis COLI protein | protein | 6 | 0% helix, 17% strand | Q61315 |
Interfaces
1 interface between chains.
- A–B · 409 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 1VJ6 · PDZ2 from PTP-BL in complex with the C-terminal ligand from the APC protein · the same entry in another collection · chain A against A, TM-score 1.00
- Q64512 · AlphaFold monomer V2.0 prediction for tyrosine-protein phosphatase non-receptor type 13… · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q64512
- Every structure of UniProt Q61315
- Elsewhere: RCSB PDB 1VJ6 · PDBe 1VJ6 · UniProt Q64512 · UniProt Q61315
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