Research workbench
Crystal structure of putative holliday junction resolvase
Analyse Crystal structure of putative holliday junction resolvase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VHX
- Type
- protein
- Length
- 278 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative holliday junction resolvase
- EC
- 3.1.-.-
- UniProt
- O34634
- Pockets
- 3 · best druggability 0.63
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative holliday junction resolvase (EC 3.1.-.-) | protein | 140 | 44% helix, 28% strand | O34634 |
| B | Putative holliday junction resolvase (EC 3.1.-.-) | protein | 138 | 41% helix, 27% strand | O34634 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 354 | 0.63 | 0.79 | 41 | empty |
| 2 | 155 | 0.43 | 0.75 | 30 | empty |
| 3 | 86 | 0.32 | 0.73 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 930 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 12 modified (engineered).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34634
- Elsewhere: RCSB PDB 1VHX · PDBe 1VHX · UniProt O34634
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