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Crystal structure of a stabilizer of iron transporter
Analyse Crystal structure of a stabilizer of iron transporter in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VH4
- Type
- protein
- Length
- 824 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sufd protein
- UniProt
- P77689
- Pockets
- 6 · best druggability 0.53
Structure
x-ray diffraction · 2 distinct chains · 21% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sufd protein | protein | 410 | 20% helix, 40% strand | P77689 |
| B | Sufd protein | protein | 414 | 21% helix, 40% strand | P77689 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 171 | 0.53 | 0.79 | 29 | empty |
| 2 | 158 | 0.50 | 0.78 | 28 | empty |
| 3 | 94 | 0.41 | 0.78 | 20 | empty |
| 4 | 98 | 0.39 | 0.76 | 22 | empty |
| 5 | 118 | 0.38 | 0.74 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 1611 Ų buried · 30 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P77689
- Elsewhere: RCSB PDB 1VH4 · PDBe 1VH4 · UniProt P77689
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