Research workbench
Crystal structure of T.TH. HB8 CTP synthetase
Analyse Crystal structure of T.TH. HB8 CTP synthetase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VCM
- Type
- protein
- Length
- 531 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CTP synthetase
- EC
- 6.3.4.2
- UniProt
- Q5SIA8
- Pockets
- 5 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CTP synthetase (EC 6.3.4.2) | protein | 531 | 39% helix, 21% strand | Q5SIA8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 265 | 0.55 | 0.77 | 43 | empty |
| 2 | 143 | 0.48 | 0.78 | 23 | empty |
| 3 | 81 | 0.47 | 0.82 | 16 | empty |
| 4 | 57 | 0.33 | 0.77 | 14 | empty |
| 5 | 57 | 0.29 | 0.75 | 13 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SIA8
- Elsewhere: RCSB PDB 1VCM · PDBe 1VCM · UniProt Q5SIA8
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