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Solution structure of VHR1, the first cyclotide from root tissue

Analyse Solution structure of VHR1, the first cyclotide from root tissue in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1VB8
Type: protein
Length: 30 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Viola hederacea root peptide 1
UniProt: P83937

Structure

solution nmr · 1 distinct chain · 10% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Viola hederacea root peptide 1	protein	30	10% helix, 7% strand	P83937

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1VB8 · solution structure of vhr1, the first cyclotide from root tissue · the same entry in another collection · chain A against A, TM-score 1.00
P83937 · AlphaFold monomer V2.0 prediction for root cyclotide 1 (P83937) · a predicted model of the same protein · chain A against A, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P83937
Elsewhere: RCSB PDB 1VB8 · PDBe 1VB8 · UniProt P83937

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