Research workbench
Solution structure of transcription factor SP1 DNA binding domain (zinc finger 1)
Analyse Solution structure of transcription factor SP1 DNA binding domain (zinc finger… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1VA1
- Type
- protein
- Length
- 37 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcription factor SP1
- UniProt
- P08047
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 32% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor SP1 | protein | 37 | 32% helix, 11% strand | P08047 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1VA1 · Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1) · the same entry in another collection · chain A against A, TM-score 1.00
- P08047 · AlphaFold monomer V2.0 prediction for transcription factor SP1 (P08047) · a predicted model of the same protein · chain A against A, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08047
- Elsewhere: RCSB PDB 1VA1 · PDBe 1VA1 · UniProt P08047
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