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Crystal structure analysis of the site specific mutant (Q253C) of bovine carbonic anhydrase II

Analyse Crystal structure analysis of the site specific mutant (Q253C) of bovine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1V9I
Type: protein
Length: 261 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Carbonic anhydrase II
EC: 4.2.1.1
UniProt: P00921
Ligands: ZN
Pockets: 2 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C	Carbonic anhydrase II (EC 4.2.1.1)	protein	261	15% helix, 28% strand	P00921

Ligands and binding sites

ZN · Zinc ion · metal · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	221	0.57	0.79	32	empty
2	59	0.27	0.73	12	empty

Compared structures

1V9I · Crystal Structure Analysis of the site specific mutant (Q253C) of bovine carbonic… · the same entry in another collection · chain C against C, TM-score 1.00
P00921 · AlphaFold monomer V2.0 prediction for carbonic anhydrase 2 (P00921) · a predicted model of the same protein · chain C against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00921
Elsewhere: RCSB PDB 1V9I · PDBe 1V9I · UniProt P00921

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