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Solution structure of the lim domain of the human actin binding lim protein 2

Analyse Solution structure of the lim domain of the human actin binding lim protein 2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1V6G
Type: protein
Length: 81 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Actin binding lim protein 2
UniProt: Q6H8Q1
Ligands: ZN
Pockets: 1 · best druggability 0.31

Structure

solution nmr · 1 distinct chain · 9% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Actin binding lim protein 2	protein	81	9% helix, 20% strand	Q6H8Q1

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.31	0.74	18	empty

Compared structures

1V6G · Solution Structure of the LIM Domain of the Human Actin Binding LIM Protein 2 · the same entry in another collection · chain A against A, TM-score 1.00
Q6H8Q1 · AlphaFold monomer V2.0 prediction for actin-binding lim protein 2 (Q6H8Q1) · a predicted model of the same protein · chain A against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6H8Q1
Elsewhere: RCSB PDB 1V6G · PDBe 1V6G · UniProt Q6H8Q1

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