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Solution structure of mouse hypothetical gene (riken cdna 3300001G02) product homologous to ubiquitin fold

Analyse Solution structure of mouse hypothetical gene (riken cdna 3300001G02) product… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1V2Y
Type: protein
Length: 105 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 3300001G02RIK protein
UniProt: Q8VIK1
Pockets: 1 · best druggability 0.35

Structure

solution nmr · 1 distinct chain · 26% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	3300001G02RIK protein	protein	105	26% helix, 26% strand	Q8VIK1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.35	0.76	14	empty

Compared structures

1V2Y · Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous… · the same entry in another collection · chain A against A, TM-score 1.00
Q8VIK1 · AlphaFold monomer V2.0 prediction for U11/U12 small nuclear ribonucleoprotein 25 kda… · a predicted model of the same protein · chain A against A, TM-score 0.79

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8VIK1
Elsewhere: RCSB PDB 1V2Y · PDBe 1V2Y · UniProt Q8VIK1

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