Research workbench
Carbohydrate binding module (CBM6CM-2) from cellvibrio mixtus lichenase 5A
Analyse Carbohydrate binding module (CBM6CM-2) from cellvibrio mixtus lichenase 5A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1UXZ
- Type
- protein
- Length
- 262 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cellulase B
- UniProt
- O07653
- Pockets
- 2 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 62% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Cellulase B | protein | 131 | 2% helix, 62% strand | O07653 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 129 | 0.38 | 0.74 | 22 | empty |
| 2 | 75 | 0.36 | 0.77 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 475 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 1UXZ · Carbohydrate binding module (CBM6cm-2) from Cellvibrio mixtus lichenase 5A · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O07653
- Elsewhere: RCSB PDB 1UXZ · PDBe 1UXZ · UniProt O07653
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