Research workbench
Bence-jones immunoglobulin rei variable portion, T39K mutant
Analyse Bence-jones immunoglobulin rei variable portion, T39K mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BWW
- Type
- protein
- Length
- 218 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (ig kappa chain V-I region rei)
- UniProt
- P01607
- Pockets
- 4 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein (ig kappa chain V-I region rei) | protein | 109 | 3% helix, 50% strand | P01607 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.39 | 0.80 | 12 | empty |
| 2 | 88 | 0.35 | 0.75 | 16 | empty |
| 3 | 75 | 0.33 | 0.75 | 19 | empty |
| 4 | 82 | 0.32 | 0.74 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 732 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1BWW · Bence-jones immunoglobulin rei variable portion, T39K mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01607
- Elsewhere: RCSB PDB 1BWW · PDBe 1BWW · UniProt P01607
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