Research workbench
A single-chain T cell receptor
Analyse A single-chain T cell receptor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BWM
- Type
- protein
- Length
- 249 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (alpha-beta T cell receptor (TCR) (D10))
- Pockets
- 4 · best druggability 0.66
Structure
solution nmr · 1 distinct chain · 0% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (alpha-beta T cell receptor (TCR) (D10)) | protein | 249 | 0% helix, 33% strand | — |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.66 | 0.90 | 21 | empty |
| 2 | 95 | 0.51 | 0.82 | 21 | empty |
| 3 | 103 | 0.37 | 0.75 | 21 | empty |
| 4 | 51 | 0.25 | 0.74 | 18 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1BWM · A single-chain T cell receptor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1BWM · PDBe 1BWM
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