Research workbench
Deacetoxycephalosporin C synthase complexed with deacetoxycephalosporin C
Analyse Deacetoxycephalosporin C synthase complexed with deacetoxycephalosporin C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1UOG
- Type
- protein
- Length
- 256 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Deacetoxycephalosporin C synthetase
- EC
- 1.14.20.1
- UniProt
- P18548
- Ligands
- P1C, FE2
- Pockets
- 2 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deacetoxycephalosporin C synthetase (EC 1.14.20.1) | protein | 256 | 33% helix, 24% strand | P18548 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 238 | 0.59 | 0.80 | 33 | P1C |
| 2 | 60 | 0.28 | 0.74 | 15 | empty |
Compared structures
- 1UOG · Deacetoxycephalosporin C synthase complexed with deacetoxycephalosporin C · the same entry in another collection · chain A against A, TM-score 1.00
- P18548 · AlphaFold monomer V2.0 prediction for deacetoxycephalosporin C synthase (P18548) · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18548
- Elsewhere: RCSB PDB 1UOG · PDBe 1UOG · UniProt P18548
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