Research workbench
Structure of putative acetyltransferase, yycn protein of bacillus subtilis
Analyse Structure of putative acetyltransferase, yycn protein of bacillus subtilis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1UFH
- Type
- protein
- Length
- 309 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Yycn protein
- UniProt
- O32293
- Pockets
- 6 · best druggability 0.70
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Yycn protein | protein | 155 | 43% helix, 21% strand | O32293 |
| B | Yycn protein | protein | 154 | 44% helix, 23% strand | O32293 |
Pockets
6 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 337 | 0.70 | 0.83 | 36 | empty |
| 2 | 328 | 0.66 | 0.80 | 29 | empty |
| 3 | 297 | 0.55 | 0.75 | 36 | empty |
| 4 | 184 | 0.54 | 0.79 | 21 | empty |
| 5 | 207 | 0.53 | 0.77 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 489 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 1UFH · Structure of putative acetyltransferase, YYCN protein of Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
- O32293 · AlphaFold monomer V2.0 prediction for uncharacterized N-acetyltransferase yycn (O32293) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O32293
- Elsewhere: RCSB PDB 1UFH · PDBe 1UFH · UniProt O32293
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