Research workbench

Crystal structure of the single-stranded DNA-binding protein from mycobacterium tuberculosis

Analyse Crystal structure of the single-stranded DNA-binding protein from mycobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1UE7
Type: protein
Length: 397 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Single-strand binding protein
UniProt: P0A610
Pockets: 2 · best druggability 0.38

Structure

x-ray diffraction · 4 distinct chains · 9% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Single-strand binding protein	protein	106	7% helix, 45% strand	P0A610
B	Single-strand binding protein	protein	98	10% helix, 46% strand	P0A610
C	Single-strand binding protein	protein	98	7% helix, 40% strand	P0A610
D	Single-strand binding protein	protein	95	11% helix, 51% strand	P0A610

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	82	0.38	0.77	15	empty
2	79	0.33	0.75	20	empty

Interfaces

2 interfaces between chains.

A–B · 759 Å² buried · 6 hydrogen bonds · protein-protein
C–D · 727 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

1UE7 · Crystal structure of the single-stranded dna-binding protein from mycobacterium… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A610
Elsewhere: RCSB PDB 1UE7 · PDBe 1UE7 · UniProt P0A610

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.