Research workbench
Solution structure of a diiron protein model: due FERRI(II) turn mutant
Analyse Solution structure of a diiron protein model: due FERRI(II) turn mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1U7M
- Type
- protein
- Length
- 106 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Four-helix bundle model
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.62
Structure
solution nmr · 1 distinct chain · 79% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Four-helix bundle model | protein | 53 | 79% helix, 0% strand | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 72 | 0.62 | 0.90 | 13 | empty |
| 2 | 92 | 0.55 | 0.85 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1053 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 1U7M · Solution structure of a diiron protein model: Due Ferri(II) turn mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1U7M · PDBe 1U7M
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