Research workbench
Crystal structure of amtb from E.COLI with methyl ammonium.
Analyse Crystal structure of amtb from E.COLI with methyl ammonium. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1U7C
- Type
- protein
- Length
- 383 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable ammonium transporter
- UniProt
- P69681
- Ligands
- NME
- Pockets
- 4 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable ammonium transporter | protein | 383 | 74% helix, 2% strand | P69681 |
Ligands and binding sites
- NME · Methylamine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 170 | 0.63 | 0.84 | 28 | empty |
| 2 | 167 | 0.52 | 0.79 | 32 | NME |
| 3 | 65 | 0.37 | 0.78 | 16 | empty |
| 4 | 53 | 0.31 | 0.76 | 10 | empty |
Modifications
Observed in the structure: 11 modified (engineered).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69681
- Elsewhere: RCSB PDB 1U7C · PDBe 1U7C · UniProt P69681
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