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Triglycine variant of the arno pleckstrin homology domain in complex with INS(1,3,4,5)P4

Analyse Triglycine variant of the arno pleckstrin homology domain in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1U27
Type
protein
Length
119 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cytohesin 2
UniProt
P63034
Ligands
4IP
Pockets
1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 38% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACytohesin 2protein11913% helix, 38% strandP63034

Ligands and binding sites

  • 4IP · Inositol-(1,3,4,5)-tetrakisphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1960.370.76214IP

Compared structures

  • 1U27 · Triglycine variant of the ARNO Pleckstrin Homology Domain in complex with Ins(1,3,4,5)P4 · the same entry in another collection · chain A against A, TM-score 1.00
  • P63034 · AlphaFold monomer V2.0 prediction for cytohesin-2 (P63034) · a predicted model of the same protein · chain A against A, TM-score 0.96

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