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Crystal structure of selenomonas ruminantium phytase

Analyse Crystal structure of selenomonas ruminantium phytase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1U24
Type: protein
Length: 628 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Myo-inositol hexaphosphate phosphohydrolase
EC: 3.1.3.72
UniProt: Q7WUJ1
Pockets: 5 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Myo-inositol hexaphosphate phosphohydrolase (EC 3.1.3.72)	protein	314	38% helix, 17% strand	Q7WUJ1

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	307	0.58	0.77	37	empty
2	319	0.57	0.76	45	empty
3	189	0.53	0.78	33	empty
4	146	0.49	0.78	23	empty
5	127	0.48	0.79	18	empty

Interfaces

1 interface between chains.

A–B · 245 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 12 modified (engineered).

Compared structures

1U24 · Crystal structure of Selenomonas ruminantium phytase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7WUJ1
Elsewhere: RCSB PDB 1U24 · PDBe 1U24 · UniProt Q7WUJ1

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