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NMR structure of the pheromone binding protein from antheraea polyphemus at acidic pH

Analyse NMR structure of the pheromone binding protein from antheraea polyphemus at… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1TWO
Type: protein
Length: 142 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pheromone-binding protein
UniProt: P20797
Pockets: 1 · best druggability 0.64

Structure

solution nmr · 1 distinct chain · 44% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pheromone-binding protein	protein	142	44% helix, 0% strand	P20797

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	457	0.64	0.76	36	empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1TWO · NMR structure of the pheromone binding protein from Antheraea polyphemus at acidic pH · the same entry in another collection · chain A against A, TM-score 1.00
P20797 · AlphaFold monomer V2.0 prediction for pheromone-binding protein (P20797) · a predicted model of the same protein · chain A against A, TM-score 0.49

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P20797
Elsewhere: RCSB PDB 1TWO · PDBe 1TWO · UniProt P20797

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