Research workbench
Native crystal structure of SPE16
Analyse Native crystal structure of SPE16 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1TW0
- Type
- protein
- Length
- 314 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pathogenesis-related class 10 protein spe-16
- UniProt
- Q6T6J0
- Pockets
- 1 · best druggability 0.88
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Pathogenesis-related class 10 protein spe-16 | protein | 157 | 29% helix, 45% strand | Q6T6J0 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1099 | 0.88 | 0.89 | 128 | empty |
Interfaces
1 interface between chains.
- A–B · 666 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 1TW0 · Native crystal structure of SPE16 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6T6J0
- Elsewhere: RCSB PDB 1TW0 · PDBe 1TW0 · UniProt Q6T6J0
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