GL1X · GenesisL1 explorer

Research workbench

Chorismate lyase with product, 1.0 a resolution

Analyse Chorismate lyase with product, 1.0 a resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1TT8
Type
protein
Length
164 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Chorismate-pyruvate lyase
EC
4.-.-.-
UniProt
P26602
Ligands
PHB
Pockets
1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 38% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AChorismate-pyruvate lyase (EC 4.-.-.-)protein16424% helix, 38% strandP26602

Ligands and binding sites

  • PHB · P-hydroxybenzoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1500.700.9818empty

Compared structures

  • 1TT8 · Chorismate lyase with product, 1.0 a resolution · the same entry in another collection · chain A against A, TM-score 1.00
  • P26602 · AlphaFold monomer V2.0 prediction for chorismate pyruvate-lyase (P26602) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.